The detailed information of tRNA gene sequence


Sequence ID>SRA1003039
Genome IDSRR002326.165838
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 55
End posion on genome 144
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
cgccgcctgc
tRNA gene sequence
GGAGAGGTGCCAGAGTGGTCGATCGGGACGGTCTCGAAAACCGTTGTACCTTCACCGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position
gttctgccgc
Secondary structure (Cloverleaf model)
>SRA1003039	Ser	CGA
                   c      GCCA gttctgccgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G       +   | |                 T T
    T       T C G G
      C G A        G     TGTACCTTCACCGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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