The detailed information of tRNA gene sequence


Sequence ID>SRA1003048
Genome IDSRR002326.170340
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 87
End posion on genome 11
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ggcgatccgt
tRNA gene sequence 
CGGGGAGTGGCGCAGCCTGGTAGCGCGTCTGCTTTGGGAGCAGAGGGTCGCAGGTTCGAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
tcatttgtgg
Secondary structure (Cloverleaf model)
>SRA1003048	Pro	TGG
                   t      ACCA tcatttgtgg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     G
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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