The detailed information of tRNA gene sequence


Sequence ID>SRA1003060
Genome IDSRR002326.176105
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 89
End posion on genome 165
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaagaatac
tRNA gene sequence 
CGCGCGATGGAGCAGCCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAAGTTCAAA
TCTTGCTCGCGCAACCA
Downstream region at tRNA end position 
aattgatacg
Secondary structure (Cloverleaf model)
>SRA1003060	Met	CAT
                   c      ACCA aattgatacg
                     C   A
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C G T T C     A
      C G A        G      | | | | |     A
    C       C G A G       G C A A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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