The detailed information of tRNA gene sequence


Sequence ID>SRA1003101
Genome IDSRR002326.199601
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 166
End posion on genome 241
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agatatttaa
tRNA gene sequence 
GGTCGTATAGCATAACGGTGAATGCCAGCCGCTCATAACGGCTCAAATCTGGGTTCGATT
CCTAGTGCGACTACCA
Downstream region at tRNA end position 
attagaaaga
Secondary structure (Cloverleaf model)
>SRA1003101	Met	CAT
                   a      ACCA attagaaaga
                     G + T
                     G - C
                     T - A
                     C - G
                     G - C
                     T + G
                     A - T          T T
                    T     G A T C C     A
      C A A        A      | | + | |     G
    G       T A C G       C T G G G     C
    G       | | | |                 T T
    T       A T G C
      G A          C     CAAAT
                    A - T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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