The detailed information of tRNA gene sequence


Sequence ID>SRA1003105
Genome IDSRR002326.200485
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 238
End posion on genome 150
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnnnnG
tRNA gene sequence 
AGGGGGTCGGCCTAGTGGCCTATGGCGCACGCTTGGAAAGCGTGTTGGGCGCAAGCCCTC
GAGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
aactaaaaag
Secondary structure (Cloverleaf model)
>SRA1003105	Ser	GGA
                   G      GCCA aactaaaaag
                     A   C
                     G - C
                     G + T
                     G - C
                     G - C
                     G - C
                     T   T          T A
                    C     C T C C C     A
      T G A        G      | | | | |     G
    G       T C C G       G A G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGGGCGCAAGCCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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