The detailed information of tRNA gene sequence


Sequence ID>SRA1003110
Genome IDSRR002326.204961
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 110
End posion on genome 201
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atgaaaatac
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGCCGATTGCGCATGCTTGGAAAGCACTGTTGACGTTAATAGCG
TCACGAGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
agcatctata
Secondary structure (Cloverleaf model)
>SRA1003110	Ser	GGA
                   c      GCCA agcatctata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G A C G       G A G G G     C
    G       + | | |                 T T
    C       T T G C
      C G A        G     GTTGACGTTAATAGCGTCAC
                    C   T
                    A   C
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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