The detailed information of tRNA gene sequence


Sequence ID>SRA1003118
Genome IDSRR002326.212700
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 186
End posion on genome 115
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttttttatta
tRNA gene sequence 
GGGAGCGTAACTTAATGGTAAAGTGGTGGTCTTCAAAATCATTTTTTAAAGGTTCAAGTC
CTTTCGCTCCTGaaa
Downstream region at tRNA end position 
cttatttttt
Secondary structure (Cloverleaf model)
>SRA1003118	SeC	TCA
                   a      Gaaa cttatttttt
                     G + T
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T G
                    T     T T T C C     A
        A A        A      | | | | |     A
      T     T T C A       A A A G G     C
      G     | | | |                 T T
      G     A A G T
        T A        G     TTTTT
                    G + T
                    T - A
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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