The detailed information of tRNA gene sequence


Sequence ID>SRA1003120
Genome IDSRR002326.213630
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 29
End posion on genome 102
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccggcctga
tRNA gene sequence 
GGCAGGGTAGCTCAGCTGGTTAGAGCACGGCACTCATAATGCCGGGGTCGCGGGTTCGAG
TCCCGCCCCTGCTAttg
Downstream region at tRNA end position 
gcagtttagc
Secondary structure (Cloverleaf model)
>SRA1003120	Met	CAT
                   a      Attg gcagtttagc
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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