The detailed information of tRNA gene sequence


Sequence ID>SRA1003123
Genome IDSRR002326.220178
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 60
End posion on genome 149
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaagctatgc
tRNA gene sequence 
GGAAGGGTGGATGAGCGGTTTAAGTCACACGCCTGGAAAGCGTGCGTGGGGTTATACCCA
CCGCGGGTTCGAATCCCGCCTCTTCCGCCA
Downstream region at tRNA end position 
agaatcaagc
Secondary structure (Cloverleaf model)
>SRA1003123	Ser	GGA
                   c      GCCA agaatcaagc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        A     CGTGGGGTTATACCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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