The detailed information of tRNA gene sequence


Sequence ID>SRA1003124
Genome IDSRR002326.220953
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 31
End posion on genome 121
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaaccaacc
tRNA gene sequence 
TGGAGAGGTGGGTGAGTGGCTGAAACCAGTAGTTTGCTAAACTGCCGTAGCTCTAAAGGT
TACCGGGGGTTCGAATCCCCCCTCTCCACTAt
Downstream region at tRNA end position 
aatgttgggt
Secondary structure (Cloverleaf model)
>SRA1003124	Ser	GCT
                   c      CTAt aatgttgggt
                     T - A
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    G     C C C C C     A
    T G A G        T      | | | | |     G
  G         T G G G       G G G G G     C
  G         |   | |                 T T
  C         A A C C
    T G A          A     CGTAGCTCTAAAGGTTACC
                    G - C
                    T + G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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