The detailed information of tRNA gene sequence


Sequence ID>SRA1003131
Genome IDSRR002326.228775
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 48
End posion on genome 124
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcctgaatt
tRNA gene sequence 
GGTTATGTAGCTCAGACGGTTAGAGCGCGGCACTCATAATGCTGAGGTCGGTGGTTCGAT
TCCACTCATAACCACTA
Downstream region at tRNA end position 
tttcaacaaa
Secondary structure (Cloverleaf model)
>SRA1003131	Met	CAT
                   t      ACTA tttcaacaaa
                     G - C
                     G - C
                     T - A
                     T - A
                     A - T
                     T - A
                     G - C          T T
                    T     T C A C C     A
      A G A        A      + | | | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G + T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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