The detailed information of tRNA gene sequence


Sequence ID>SRA1003139
Genome IDSRR002326.235837
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 79
End posion on genome 3
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
accgctttca
tRNA gene sequence 
GGGCCTGTAGCTCAGCTGGTTAGAGCACACGCCTGATAAGCGTGAGGTCGGCGGTTCGAG
TCCGCCTGGGCCCACCA
Downstream region at tRNA end position 
cannnnnnnn
Secondary structure (Cloverleaf model)
>SRA1003139	Ile	GAT
                   a      ACCA cannnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G + T          T G
                    T     C C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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