The detailed information of tRNA gene sequence


Sequence ID>SRA1003141
Genome IDSRR002326.238511
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 5
End posion on genome 79
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnnngtct
tRNA gene sequence 
ACGGGCATGGTGCAACGGCTAGCATACGGGTCTCCAACACCCTTGATCTGGGTTCGAATC
CTAGTGCCCGTGCAA
Downstream region at tRNA end position 
agtaatttga
Secondary structure (Cloverleaf model)
>SRA1003141	Trp	CCA
                   t      GCAA agtaatttga
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G A T C C     A
      C A A        G      | | + | |     G
    G       C G T G       C T G G G     C
    G       | | | +                 T T
    C       G C A T
      T A          A     TGAT
                    C   T
                    G - C
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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