The detailed information of tRNA gene sequence


Sequence ID>W1810170580
Genome IDPJKY01000001
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesAkkermansia muciniphila GP01 [PJKY]
Start position on genome 555843
End posion on genome 555935
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtttccaagt
tRNA gene sequence 
GGAGAGATGGCTGAGCTGGTCTAAGGCACTCGACTCGAAATCGAACGTGGGCTTTAAAAC
CCACCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
gtttttttaa
Secondary structure (Cloverleaf model)
>W1810170580	Ser	CGA
                   t      GCCA gtttttttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G T G G G     C
  G           + | |                 T T
  T         A G G C
    C T A          A     CGTGGGCTTTAAAACCCACC
                    C   A
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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