The detailed information of tRNA gene sequence


Sequence ID>SRA1003144
Genome IDSRR002326.240877
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 123
End posion on genome 218
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgactgtccg
tRNA gene sequence 
GGAGGCGAAGGGGCCCTGGTGGGCCCACTGGTCTTCAAAACCAGGTGGGGCACGTGATGC
GTGCCCGGGTAGGTTCGATTCCTACACGCTTCCGCCt
Downstream region at tRNA end position 
cggcccgcgt
Secondary structure (Cloverleaf model)
>SRA1003144	SeC	TCA
                   g      GCCt cggcccgcgt
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     C - G
                     G - C
                     A   A          T T
                    A     C A T C C     A
      T C C        G      | | | | |     G
    G       C G G G       G T A G G     C
    G       | | | |                 T T
    T       G C C C
      G G          A     GTGGGGCACGTGATGCGTGCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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