The detailed information of tRNA gene sequence


Sequence ID>SRA1003152
Genome IDSRR002326.245288
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 236
End posion on genome 145
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gacgaacaat
tRNA gene sequence 
GGAGACGTCGCATAGTTCGGCTTAGTGCACCACCCTGCTAAGGTGGAGTACCCTAACGGG
TACCGAGGGTTCAAATCCCTCCGTCTCCGCAA
Downstream region at tRNA end position 
aatatgtccc
Secondary structure (Cloverleaf model)
>SRA1003152	Ser	GCT
                   t      GCAA aatatgtccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
    T T G A        C      | | | | |     A
  C         T A C G       G A G G G     C
  G         + | | |                 T T
  G         G T G C
    C T T A        A     AGTACCCTAACGGGTACC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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