The detailed information of tRNA gene sequence


Sequence ID>SRA1003160
Genome IDSRR002326.252952
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 222
End posion on genome 130
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccaagattca
tRNA gene sequence 
GGAAACGTGACCGAGCGGCCGAAGGTGCTCCCCTGCTAAGGGAGTATGGGGTGTAGAGCC
TCATCGAGAGTTCGAATCTCTCCGTTTCCGCCA
Downstream region at tRNA end position 
atttgaaacc
Secondary structure (Cloverleaf model)
>SRA1003160	Ser	GCT
                   a      GCCA atttgaaacc
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     C - G
                     G - C          T A
                    T     C T C T C     A
      C G A        G      | | | | |     G
    G       G C C A       G A G A G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATGGGGTGTAGAGCCTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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