The detailed information of tRNA gene sequence


Sequence ID>SRA1003175
Genome IDSRR002326.278290
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 109
End posion on genome 183
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gtcgaaaccc
tRNA gene sequence 
GGGCTTGTAGCTCAGGTGGTTAGAGCGCTACACTGATAATGTAGAGGTCCGTGGTTCGAG
TCCACGCAGGCCCACtg
Downstream region at tRNA end position 
taaccagcgg
Secondary structure (Cloverleaf model)
>SRA1003175	Ile	GAT
                   c      ACtg taaccagcgg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     G C A C C     A
      G G A        A      | | | | |     G
    T       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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