The detailed information of tRNA gene sequence


Sequence ID>SRA1003179
Genome IDSRR002326.280158
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 105
End posion on genome 180
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gagaacgcgt
tRNA gene sequence 
GGGTCTGTAGCTCAGTTGGTTAGAGCACCGTCTTGATAAGGCGGGGTCGCTGGTTCGAAT
CCAGCCAGACCCACCA
Downstream region at tRNA end position 
gggcgacaag
Secondary structure (Cloverleaf model)
>SRA1003179	Ile	GAT
                   t      ACCA gggcgacaag
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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