The detailed information of tRNA gene sequence


Sequence ID>SRA1003184
Genome IDSRR002326.282976
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 187
End posion on genome 113
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttcttaaat
tRNA gene sequence 
TGACACTTAGCTCAGTTGGTAGCAGCAGGACACTCATAATGTCAAGGTCACAGGTTCAAT
TCCTGTAGTGTCAACtt
Downstream region at tRNA end position 
ttaatattgg
Secondary structure (Cloverleaf model)
>SRA1003184	Met	CAT
                   t      ACtt ttaatattgg
                     T - A
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     T - A          T T
                    T     T G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G         | | |                 T T
    G       C A G C
      T A G        A     AGGTC
                    G   A
                    G - C
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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