The detailed information of tRNA gene sequence


Sequence ID>SRA1003204
Genome IDSRR002326.305569
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 24
End posion on genome 99
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtaaagcatt
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGTAACGGTCTCCAAAACCGTAGGTTGGGGGTTCGAGG
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
gacagaaagc
Secondary structure (Cloverleaf model)
>SRA1003204	Trp	CCA
                   t      GCCA gacagaaagc
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          G G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      C A          A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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