The detailed information of tRNA gene sequence


Sequence ID>SRA1003205
Genome IDSRR002326.305592
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 54
End posion on genome 130
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aataaaattt
tRNA gene sequence 
GCTGGTATAGCTTAATTGGATAGAGCGCAACACTCATAACGTTGTATATATAGGTTCAAA
TCCTATTACCAGTACCA
Downstream region at tRNA end position 
ctaactgtaa
Secondary structure (Cloverleaf model)
>SRA1003205	Met	CAT
                   t      ACCA ctaactgtaa
                     G + T
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     T A T C C     A
      T A A        A      | | | | |     A
    T       T T C G       A T A G G     C
    G       + | | |                 T T
    G       G A G C
      A T A        G     TATAT
                    C - G
                    A - T
                    A - T
                    C - G
                    A   C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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