The detailed information of tRNA gene sequence


Sequence ID>SRA1003228
Genome IDSRR002326.319502
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 69
End posion on genome 144
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
atatatatat
tRNA gene sequence 
CCGCCTGTAGCTCAGTTGGTAGAGCGCCGAGCTTATACCTCGGTGGTCCTTGGTTCAAGT
CCAAGCGGGCGGACAA
Downstream region at tRNA end position 
taatacgaaa
Secondary structure (Cloverleaf model)
>SRA1003228	Ile	TAT
                   t      ACAA taatacgaaa
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     G A A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     TGGTC
                    C - G
                    C - G
                    G - C
                    A - T
                    G - C
                  C       C
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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