The detailed information of tRNA gene sequence


Sequence ID>SRA1003231
Genome IDSRR002326.322027
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 102
End posion on genome 30
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atttaaagaT
tRNA gene sequence 
AGTGAAGTGGAGAAGCGGCATCTCAAGTGGCTCATTACCACTGGTCTCAGGTTCGATTCC
TGACTTCGCAATtc
Downstream region at tRNA end position 
caaagtgtcc
Secondary structure (Cloverleaf model)
>SRA1003231	Met	CAT
                   T      ATtc caaagtgtcc
                     A   A
                     G - C
                     T + G
                     G - C
                     A - T
                     A - T
                     G - C          T T
                    T     A G T C C     A
        G A        G      | | | | |     G
      C     A G A G       T C A G G     C
      G     | | | |                 T T
      G     T C T C
        C A        A     GGTC
                    A - T
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       T
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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