The detailed information of tRNA gene sequence


Sequence ID>SRA1003242
Genome IDSRR002326.332678
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 248
End posion on genome 173
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
nnnnnnnnct
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTAGAGCGCTTGCATGGCATGCAAGAGGTCAGCGGTTCGATT
CCGCTCACCTCCACCA
Downstream region at tRNA end position 
gttcattatg
Secondary structure (Cloverleaf model)
>SRA1003242	Ala	GGC
                   t      ACCA gttcattatg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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