The detailed information of tRNA gene sequence


Sequence ID>SRA1003243
Genome IDSRR002326.333580
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 127
End posion on genome 53
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cactggtttt
tRNA gene sequence 
GGGCTTGTAGCTCAGGTGGTTAGAGCGCTACACTGATAATGTAGAGGTCCGTGGTTCGAG
TCCACGCAGGCCCACtc
Downstream region at tRNA end position 
tagcaacttt
Secondary structure (Cloverleaf model)
>SRA1003243	Ile	GAT
                   t      ACtc tagcaacttt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     G C A C C     A
      G G A        A      | | | | |     G
    T       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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