The detailed information of tRNA gene sequence


Sequence ID>SRA1003253
Genome IDSRR002326.342731
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 161
End posion on genome 86
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gatcacgcat
tRNA gene sequence 
GGGGGCATAGCTCAGTTGGTAGAGCGCTAGCTTTGCAAGCTAGATGTCAGGAGTTCGAAT
CTCCTTGCCTCCACCA
Downstream region at tRNA end position 
tctctcattt
Secondary structure (Cloverleaf model)
>SRA1003253	Ala	TGC
                   t      ACCA tctctcattt
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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