The detailed information of tRNA gene sequence


Sequence ID>W1810181705
Genome IDPJUV01000012
Search identical group
Phylum/ClassBacillota
SpeciesClostridium perfringens SYD-NE41 [PJUV]
Start position on genome 2456208
End posion on genome 2456283
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGAGTATAGCTCAGTTGGGAGAGCACCTGCCTTGCACGCAGGGGGTCAGGAGTTCGAAT
CTCCTTACCTCCACCA
Downstream region at tRNA end position 
aaaactctaa
Secondary structure (Cloverleaf model)
>W1810181705	Ala	TGC
                   n      ACCA aaaactctaa
                     G - C
                     G - C
                     G + T
                     A   C
                     G - C
                     T - A
                     A - T          T A
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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