The detailed information of tRNA gene sequence


Sequence ID>SRA1003263
Genome IDSRR002326.349951
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 185
End posion on genome 96
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caaacggtct
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCAACGCTTTGCTAAAGCGTCATACGGGAAACTGTA
TCGAGAGTTCGAATCTCTCCGTCTCCGCCA
Downstream region at tRNA end position 
gccgtgggtc
Secondary structure (Cloverleaf model)
>SRA1003263	Ser	GCT
                   t      GCCA gccgtgggtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G A G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CATACGGGAAACTGTATC
                    A - T
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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