The detailed information of tRNA gene sequence


Sequence ID>SRA1003271
Genome IDSRR002326.354467
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 110
End posion on genome 21
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tccaatttat
tRNA gene sequence 
GGATGGGTGGCCGAGTGGTTTAAGGCAGCAGTCTTGAAAACTGCCGAGCGTGAAAGCGTT
CCGTGAGTTCAAATCTCACCCCATCCGCCA
Downstream region at tRNA end position 
ctactttttt
Secondary structure (Cloverleaf model)
>SRA1003271	Ser	TGA
                   t      GCCA ctactttttt
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     A
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGAGCGTGAAAGCGTTCC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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