The detailed information of tRNA gene sequence


Sequence ID>SRA1003298
Genome IDSRR002326.370702
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 102
End posion on genome 187
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtgacgtact
tRNA gene sequence 
GGAGACGTGTCGGAGTGGTCTAACGTACCTCCTTGCTAAGGAGGCAGGTGTCACAGCCTC
GCGAGTTCGAATCTCGCCGTCTCCGCac
Downstream region at tRNA end position 
tatttatnnn
Secondary structure (Cloverleaf model)
>SRA1003298	Ser	GCT
                   t      GCac tatttatnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C G C T C     A
      T G A        G      | | | | |     G
    G       G G C T       G C G A G     C
    G         | |                   T T
    T       A C G T
      C T A        A     CAGGTGTCACAGCCTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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