The detailed information of tRNA gene sequence


Sequence ID>SRA1003302
Genome IDSRR002326.373167
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 169
End posion on genome 245
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggtgtatcga
tRNA gene sequence 
CGCGGGGTGGAGCAGCTCGGTAGCTCGCCGGGCTCATAACCCGGAGGTCGCAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
acgtcgcagc
Secondary structure (Cloverleaf model)
>SRA1003302	Met	CAT
                   a      ACCA acgtcgcagc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | | | | |     A
    T       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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