The detailed information of tRNA gene sequence


Sequence ID>SRA1003315
Genome IDSRR002326.386052
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 114
End posion on genome 189
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
atgagcgtat
tRNA gene sequence 
GCCTCGGTAGCTCAGTGGATAGAGCGACCCCCTCCTAAGGGGTAGGTCGGACGTTCGATT
CGTCTTCGGGGCGCCA
Downstream region at tRNA end position 
attttctatt
Secondary structure (Cloverleaf model)
>SRA1003315	Arg	CCT
                   t      GCCA attttctatt
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G + T          T T
                    T     T C T G C     A
      T G A        A      + | | | |     G
    G       C T C G       G G A C G     C
    G       | | | |                 T T
    A       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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