The detailed information of tRNA gene sequence


Sequence ID>SRA1003321
Genome IDSRR002326.387573
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 224
End posion on genome 150
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaggctcaat
tRNA gene sequence 
ACATCTTTCGTTCAACGGCATGATACCGGGCTCCAAACTCGTGTGATGTGGGTTCGAATC
CTACAGGATGTGCCA
Downstream region at tRNA end position 
aattttttaa
Secondary structure (Cloverleaf model)
>SRA1003321	Trp	CCA
                   t      GCCA aattttttaa
                     A - T
                     C - G
                     A - T
                     T - A
                     C - G
                     T + G
                     T - A          T A
                    T     C A T C C     A
        A A        C      | | + | |     G
      C     C T T G       G T G G G     C
      G       + | +                 T T
      G     T G A T
        C A        A     GTGAT
                    C   T
                    C - G
                    G - C
                    G + T
                    G - C
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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