The detailed information of tRNA gene sequence


Sequence ID>SRA1003330
Genome IDSRR002326.396066
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 24
End posion on genome 95
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ctataagaac
tRNA gene sequence 
GGGCTCTTAGCTCAGTGGCAGAGCAGCCGACTGCAGATCGGCAGGTCGCTGGTTCAATTC
CGGCAGGGCCCTtaa
Downstream region at tRNA end position 
tttttaattt
Secondary structure (Cloverleaf model)
>SRA1003330	Cys	GCA
                   c      Ttaa tttttaattt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T T
                    T     C G G C C     A
        G A        A      | | + | |     A
      T     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     AGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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