The detailed information of tRNA gene sequence


Sequence ID>SRA1003340
Genome IDSRR002326.401971
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 72
End posion on genome 159
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
caaaaaaata
tRNA gene sequence 
GCTGGAGTGGCGGAACTGGCAGACGCACAGGACTTAAAATCCTGCGGGCGTAAAGCCCAT
ACCGGTTCAATTCCGGTCTTCAGCACCA
Downstream region at tRNA end position 
aatatcgcgg
Secondary structure (Cloverleaf model)
>SRA1003340	Leu	TAA
                   a      ACCA aatatcgcgg
                     G - C
                     C - G
                     T - A
                     G - C
                     G + T
                     A - T
                     G - C          T T
                    T     T G G C C     A
      C A A        G      | | | | |     A
    T       G G C G       A C C G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGGGCGTAAAGCCCAT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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