The detailed information of tRNA gene sequence


Sequence ID>SRA1003357
Genome IDSRR002326.409576
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 146
End posion on genome 221
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ctcttgctgt
tRNA gene sequence 
GGGGGTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCAGCAGTTCGATC
CTGCTTATCTCCACCA
Downstream region at tRNA end position 
cagaattagc
Secondary structure (Cloverleaf model)
>SRA1003357	Ala	GGC
                   t      ACCA cagaattagc
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     A - T          C T
                    T     T C G T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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