The detailed information of tRNA gene sequence


Sequence ID>SRA1003372
Genome IDSRR002326.416771
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 280
End posion on genome 206
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnnnnnttta
tRNA gene sequence 
GGTCCTTTGGCCCGAGTGGCTAGGCAAAGCTCTGCAAAAGCTTCTACAGCGGTTCGAATC
CGCTAGGGACCTCTA
Downstream region at tRNA end position 
aatttaaagc
Secondary structure (Cloverleaf model)
>SRA1003372	Cys	GCA
                   a      TCTA aatttaaagc
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     T - A          T A
                    T     T C G C C     A
      G A G        G      | | | | |     G
    T       C C C G       A G C G G     C
    G         | | |                 T T
    G       A G G C
      C T          A     CTAC
                    A - T
                    A - T
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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