The detailed information of tRNA gene sequence


Sequence ID>W1810192733
Genome IDPKMT01000006
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. RO1 [PKMT]
Start position on genome 188471
End posion on genome 188544
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tattcagcgt
tRNA gene sequence 
GGCGCGATAGCAAAGCGGTTATGCAACGGATTGCAAATCCGTGTAGCCCGGTTCGACTCC
GGGTCGCGCCTCCA
Downstream region at tRNA end position 
ccctctcgtc
Secondary structure (Cloverleaf model)
>W1810192733	Cys	GCA
                   t      TCCA ccctctcgtc
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T C
                    T     G G G C C     A
        G A        A      | | | | |     G
      C     A A C G       C C C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     GTAG
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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