The detailed information of tRNA gene sequence


Sequence ID>SRA1003391
Genome IDSRR002326.432974
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 94
End posion on genome 5
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttctcatac
tRNA gene sequence 
GGAGCTTTGGCCGAGTGGCTTAAGGCGCACGCTTGGAAAGCGTGTGTAGGTTAATCCCTA
CCGAGAGTTCGAATCTCTCAGGCTCCGCCA
Downstream region at tRNA end position 
tttgnnnnnn
Secondary structure (Cloverleaf model)
>SRA1003391	Ser	GGA
                   c      GCCA tttgnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T + G
                     T - A          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G A G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TGTAGGTTAATCCCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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