The detailed information of tRNA gene sequence


Sequence ID>SRA1003397
Genome IDSRR002326.435938
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 172
End posion on genome 247
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cgctttcatt
tRNA gene sequence 
GGGGCCGTAGCTCAGCTGGGAGAGCGTCGCGATGGCATTGCGAAGGTCTGGGGTTCGATC
CCCCACGGCTCCACCA
Downstream region at tRNA end position 
tcatcctgaa
Secondary structure (Cloverleaf model)
>SRA1003397	Ala	GGC
                   t      ACCA tcatcctgaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     A C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       T G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    G + T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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