The detailed information of tRNA gene sequence


Sequence ID>SRA1003398
Genome IDSRR002326.436691
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 103
End posion on genome 27
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tcgtggcgtt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCAACTGGTTTGGGACCAGTAGGTCGAGAGTTCGAA
TCCCTCCGCCCCGACCA
Downstream region at tRNA end position 
cgcccccaga
Secondary structure (Cloverleaf model)
>SRA1003398	Pro	TGG
                   t      ACCA cgcccccaga
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | |   |     G
    C       C G C G       G A G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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