The detailed information of tRNA gene sequence


Sequence ID>SRA1003400
Genome IDSRR002326.438069
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 238
End posion on genome 164
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cttgtcgaaa
tRNA gene sequence 
GGGCGGTTAGCTCAGGGGTAGAGCACTGCATTCACACTGCAGGGGTCGCAAGTTCGAAAC
TTGCACCGCCCACCA
Downstream region at tRNA end position 
aaaacgtaaa
Secondary structure (Cloverleaf model)
>SRA1003400	Val	CAC
                   a      ACCA aaaacgtaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          A A
                    T     C G T T C     A
        G A        A      | | | | |     G
      G     C T C G       G C A A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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