The detailed information of tRNA gene sequence


Sequence ID>SRA1003402
Genome IDSRR002326.438215
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 134
End posion on genome 209
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ttttgtcgcT
tRNA gene sequence 
GCGCGAGTAGCTCAGTTGGATAGAGGGTCGCCCTCCGGAGGCGAAGGTCGCAGGTTCGAC
TCCTGTCTCGCGCATtt
Downstream region at tRNA end position 
ttcccggtct
Secondary structure (Cloverleaf model)
>SRA1003402	Arg	CCG
                   T      ATtt ttcccggtct
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T C
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | |                   T T
    G       G A G G
      A T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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