The detailed information of tRNA gene sequence


Sequence ID>SRA1003403
Genome IDSRR002326.438945
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 191
End posion on genome 115
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
attttaattt
tRNA gene sequence 
GGGTTTGTAGCTCAGGTGGTTAGAGTACGTCCCTGATAAGGACGGGGTCGCAAGTTCGAG
TCTTGCCAGACCCACCA
Downstream region at tRNA end position 
ttaaacaagt
Secondary structure (Cloverleaf model)
>SRA1003403	Ile	GAT
                   t      ACCA ttaaacaagt
                     G - C
                     G - C
                     G - C
                     T - A
                     T + G
                     T - A
                     G - C          T G
                    T     C G T T C     A
      G G A        A      | | | | |     G
    T       C T C G       G C A A G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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