The detailed information of tRNA gene sequence


Sequence ID>SRA1003413
Genome IDSRR002326.451645
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 115
End posion on genome 44
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttattaaaaa
tRNA gene sequence 
AGGAAAATAGTTTAATTGGTAAAATCATAGTCTCCAAAATTGTTGTCGTAGGTTCAAATC
CTACTTTTCCTGtgt
Downstream region at tRNA end position 
ataaaaataa
Secondary structure (Cloverleaf model)
>SRA1003413	Trp	CCA
                   a      Gtgt ataaaaataa
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     A - T          T A
                    T     C A T C C     A
      T A A        A      | | | | |     A
    T       T T T G       G T A G G     C
    G       | | | +                 T T
    G       A A A T
      T A          C     TGTC
                    A - T
                    T + G
                    A - T
                    G + T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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