The detailed information of tRNA gene sequence


Sequence ID>SRA1003420
Genome IDSRR002326.456683
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 111
End posion on genome 35
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position
nnnnnttttg
tRNA gene sequence
GGGGGGTTAGCTCAGTTGGCTAGAGCATCTGCCTTGCACGCAGAGGGTCATCGGTTCGAC
TCCGATATCCTCCAACA
Downstream region at tRNA end position
aaaaggttcc
Secondary structure (Cloverleaf model)
>SRA1003420	Ala	TGC
                   g      AACA aaaaggttcc
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     G + T
                     T - A          T C
                    T     T A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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