The detailed information of tRNA gene sequence


Sequence ID>SRA1003427
Genome IDSRR002326.457742
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 65
End posion on genome 154
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcactgattt
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGTACCTGATTCGAAATCAGGCGAAGGTGTAAGCCTT
CCGTGGGTTCGAATCCCACCTTCTCCGCCA
Downstream region at tRNA end position 
tttcagcaat
Secondary structure (Cloverleaf model)
>SRA1003427	Ser	CGA
                   t      GCCA tttcagcaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | +                 T T
    T       A T G T
      C G A        A     CGAAGGTGTAAGCCTTCC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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