The detailed information of tRNA gene sequence


Sequence ID>SRA1003431
Genome IDSRR002326.462585
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 252
End posion on genome 176
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnnnnnnnna
tRNA gene sequence 
GGGTCTGTAGCTCAGCTGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGTTGGTTCGAG
TCCAACCAGACCCACCA
Downstream region at tRNA end position 
aatcaggttt
Secondary structure (Cloverleaf model)
>SRA1003431	Ile	GAT
                   a      ACCA aatcaggttt
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     C A A C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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