The detailed information of tRNA gene sequence


Sequence ID>SRA1003439
Genome IDSRR002326.466661
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 147
End posion on genome 221
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaatagtct
tRNA gene sequence 
ACGGGCATGGTGCAACGGCTAGCATACGGGTCTCCAACACCCTTGATCTGGGTTCGAATC
CTAGTGCCCGTGCAA
Downstream region at tRNA end position 
agtaatttga
Secondary structure (Cloverleaf model)
>SRA1003439	Trp	CCA
                   t      GCAA agtaatttga
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G A T C C     A
      C A A        G      | | + | |     G
    G       C G T G       C T G G G     C
    G       | | | +                 T T
    C       G C A T
      T A          A     TGAT
                    C   T
                    G - C
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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